Student Publications

 Publications from the last 7 years.

Student Publication (by year)
Fozouni, P.

Conrad, R.J., Fozouni, P., Thomas, S., Sy, H., Zhang, Q., Zhou, M-M., and Ott, M. The Short Isoform of BRD4 Promotes HIV-1 Latency by Engaging Repressive SWI/SNF Chromatin-Remodeling Complexes. Molecular Cell 67, 1-12 (2017).

Satterwhite, S.

Neff J, Knight K, Satterwhite S, Nelson N, Matthews J, Holmes SM, 2017, "Teaching Structure: A Qualitative Evaluation of a Structural Competency Training for Resident Physicians," Journal of General Internal Medicine, 32(4):430-433.

 Fernandez, F.  Fernandez, F. "Funding Affected Populations in Cuba’s Campaign against HIV/AIDS ." Hot Spots,Cultural Anthropology website, March 23, 2017. https://culanth.org/fieldsights/1079-funding-affected-populations-in-cub...
Meyer, L.K./Smith, G.A.

Delgado-Martin, C.*, Meyer, L.K.*, Huang, B.J., Shimano, K.A., Zinter, M.S., Nguyen, J.V., Smith, G.A., Taunton, J., Winter, S.S., Roderick, J.R., Kelliher, M.A., Horton, T.M., Wood, B.L., Teachey, D.T., Hermiston, M.L. (2017). JAK/STAT pathway inhibition overcomes IL7-induced glucocorticoid resistance in a subset of human T-cell acute lymphoblastic leukemias. Leukemia, 1-9.

*These authors contributed equally to this work

Macrae, T.

Bulut-Karslioglu A, Biechele S, Jin H, Macrae TA, Hejna M, Gertsenstein M, Song JS, Ramalho-Santos M. Inhibition of mTOR induces a paused pluripotent state. Nature 540, 119-123 (2016).

Liu, S.J/Horlbeck, M.A. Liu SJ, Horlbeck MA, Cho SW, Birk HS, Malatesta M, He D, Attenello FJ, Villalta JE, Cho MY, Chen Y, Mandegar MA, Olvera MP, Gilbert LA, Conklin BR, Chang HY, Weissman JS, Lim DA, 2016, "CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells," Science, 10.1126/science.aah7111.
Hullett, P.W. Hullett PW, Hamilton LS, Mesgarani N, Schreiner CE, Chang EF, 2016, "Human Superior Temporal Gyrus Organization of Spectrotemporal Modulation Tuning Derived from Speech Stimuli," J Neurosci 36:2014–2026.
Kay, K. Deng, X., Liu, D., Kay, K., Frank, L., Eden, U., 2015, "Clusterless Decoding of Position From Multiunit Activity Using A Marked Point Process Filter Neural Computation," Neural Computation, in press. PMC Journal in process.
Tang, Y. Fu, Y., Kaneko, M., Tang, Y., Stryker, M.P., 2015, "A cortical disinhibitory circuit for enhancing adult plasticity," eLife 10.7554. PMCID: PMC4337686
Greenfield, D.E. Greenfield, D.E., 2015, “Deep Data: Notes on the N of 1.” In Biosensors in Everyday Life: Getting a Sense of Things with Technologies, Bodies, and Everyday Forms of Measurement, MIT Press. In press. Book chapter.
Greninger, A.L. Greninger, A.L., 2015,”'Picornavirus–Host Interactions to Construct Viral Secretory Membranes.'  The Molecular Basis of Viral Infection,” Book chapter, edition 1. In press.
Hales, M. Hales, M., 2015, "'Native Sovereignty by the Numbers: The metrics of Yup’ik behavioral health programs.’ In Metrics: What Counts in Global Health," Vincanne Adams, ed. Durham and London: Duke University Press. Book chapter. In press.
Lee, A.M.  Lee, A.M.*, Tai, L.H.*, Zador, A., Wilbrecht, L., 2015, "Between the primate and 'reptilian'brain: Rodent models demonstrate the role of corticostriatal circuits in decision making," Neuroscience, S0306-4522(14)01091-4. Review. *co-first authors. PMCID: PMC25575943.
Lee, I.S. Lim, H.W., Kang, S.G., Ryu, J.K., Schilling, B., Fei, M., Lee, I.S., Kehasse, A., Shirakawa, K., Yokoyama, M., Schnolzer, M., Kasler, H.G., Kwon, H.S., Gibson, B.W., Sato, H., Akassoglou, K., Xiao, C., Littman, D.R., Ott, M., Verdin, E., 2015, "SIRT1 deacetylates RORγt and enhances Th17 cell generation," Journal of Experimental Medicine. In press.
Neel, D. Lin, L., Sabnis, A.J., Chan, E., Olivas, V., Cade, L., Pazarentzos, E., Asthana, S., Neel, D., Yan, J.J., Lu, X., Pham, L., Wang, M.M., Karachaliou, N., Cao, M.G., Manzano, J.L., Ramirez, J.L., Torres, J.M., Buttitta, F., Rudin, C.M., Collisson, E.A., Algazi, A., Robinson, E., Osman, I., Muñoz-Couselo, E., Cortes J., Frederick, D.T., Cooper, Z.A., McMahon, M., Marchetti, A., Rosell, R., Flaherty, K.T., Wargo, J.A., Bivona, T.G., 2015, "The Hippo effector YAP promotes resistance to RAF- and MEK-targeted cancer therapies," Nat Genet. 47(3):250-6. PMC Journal in process.
Meyerowitz, J.G. Meyerowitz, J.G., Weiss, W.A., Gustafson, W.C., 2015, "A new 'angle' on kinase inhibitor design: Prioritizing amphosteric activity above kinase inhibition," Molecular & Cellular Oncology.  PMC Journal in process.
Pattabiraman, K. Nord, A.S., Pattabiraman, K., Visel, A., Rubenstein, J.L., "Genomic perspectives of transcriptional regulation in forebrain development," Neuron, 85(1):27-47. PMC Journal in process.
Pinney, J.R. Pena, J.R., Pinney, J., Ayala, P., Desai, T., Goldspink, P.H., 2015, “Localized Delivery of Mechano-Growth Factor E-domain Peptide via Polymeric Microstructures Improves Cardiac Function following Myocardial Infarction,” Biomaterials, 46:26-34. PMCID: PMC4328136
Ramos, A.D. Ramos, A.D., Andersen, R.D., Liu S. J., Nowakowski, T.J., Hong, S. J., Gertz, C.C., Salinas, R.D., Zarabi, H., Kriegstein, A.R. & Lim, D.A. 2015, "The Long Noncoding RNA Pnky Regulates Neuronal Differentiation of Embryonic and Postnatal Neural Stem Cells," Cell Stem Cell 16: 439 - 447. PMCID: PMC4388801.
Liu, S.J. Ramos, A.D., Andersen, R.D., Liu S. J., Nowakowski, T.J., Hong, S. J., Gertz, C.C., Salinas, R.D., Zarabi, H., Kriegstein, A.R. & Lim, D.A. 2015, "The Long Noncoding RNA Pnky Regulates Neuronal Differentiation of Embryonic and Postnatal Neural Stem Cells," Cell Stem Cell 16: 439 - 447. PMC Journal in process.
Razon, N. Razon, N., 2015, “Learned Blindness: Transforming Bedouins into standardized patients. Examining health and politics in southern Israel,” Everyday Israel. Ethnologie Française. In press.
Razon, N. Ross, K.* & Razon, N.*, 2015, “Interrogating Boundaries and Acknowledging Fluidity: Shifting Identity Markers in Palestine/Israel,” Journal of Borderlands Studies, in press.
Lindquist, R.A. Tate, M.C.*, Lindquist, R.A.*, Nguyen, T., Sanai, N., Barkovich, A.J., Huang, E.J., Rowitch, D.H. & Alvarez-Buylla, A., 2015, "Postnatal growth of the human pons: A morphometric and immunohistochemical analysis," J Comp Neurol, 523: 449-62. *Co-first authors. PMCID: PMC4270924. 
Theodoris, C. Theodoris C.V., Li M., White M.P., Liu L., He D., Pollard K.S., Bruneau B.G. & Srivastava D., 2015, "Human Disease Modeling Reveals Integrated Transcriptional and Epigenetic Mechanisms of NOTCH1 Haploinsufficiency," Cell, 60(6):1072-86. PMCID:PMC4359747.
Nnadi, C. Torres, I.O., Kuchenbecker, K.M., Nnadi, C.I., Fletterick, R.J., Kelly, M.J., Fujimori, D.G., 2015, "Histone demethylase KDM5A is regulated by its reader domain through a positive-feedback mechanism, " Nat Commun, 6:6204. PMC Journal in process.
Walsh, L.A. Walsh, L, Ryu, J, Bock, S, Koval, M, Mauro, T, Ross, R, Desai, T., 2015, "Nanotopography Facilitates in Vivo Transdermal Delivery of High Molecular Weight Therapeutics through an Integrin-Dependent Mechanism," Nano Lett., Epub ahead of print. PMC Journal in process.
Wu, J. Wu, J., Pipathsouk, A., Keizer-Gunnink, A., Fusetti, F., Alkema, W., Liu, S., Altschuler, S., Wu, L., Kortholt, A., Weiner, O.D., 2015, "Homer3 regulates the establishment of neutrophil polarity," Mol Biol Cell. [Epub ahead of print March 4 2015]. PMC Journal in process. 
Levin, M.H. Asavapanumas, N., Ratelade, J., Papadopoulos, M.C., Bennett, J.L., Levin, M.H. & Verkman, A.S., 2014, "Experimental mouse model of optic neuritis with inflammatory demyelination produced by passive transfer of neuromyelitis optica-immunoglobulin G," J Neuroinflammation, 11: 16. PMCID: PMC3909205.
LaFlam, T.N. Baravalle, G., Greer, A.M., LaFlam, T.N. & Shin, J.S., 2014, "Antigen-conjugated human IgE induces antigen-specific T cell tolerance in a humanized mouse model," J Immunol, 192: 3280-8. Non-federal funded.
Daub, A. Barmada, S.J., Serio, A., Arjun, A., Bilican, B., Daub, A., Ando, D.M., Tsvetkov, A., Pleiss, M., Li, X., Peisach, D., Shaw, C., Chandran, S. & Finkbeiner, S., 2014, "Autophagy induction enhances TDP43 turnover and survival in neuronal ALS models," Nat Chem Biol, 10: 677-85. PMCID: PMC4106236.
Chou, J. Bonnans, C., Chou, J. & Werb, Z., 2014, "Remodelling the extracellular matrix in development and disease," Nat Rev Mol Cell Biol, 15: 786-801. PMCID: PMC4316204
Pinney, J.R. Cerchiari, A., Garbe, J.C., Todhunter, M.E., Jee, N.Y., Pinney, J.R., LaBarge, M.A., Desai, T.A. & Gartner, Z.J., 2014, "Formation of Spatially and Geometrically Controlled Three-Dimensional Tissues in Soft Gels by Sacrificial Micromolding," Tissue Eng Part C Methods. PMCID Journal - in Process.
Ostrem, J. Chen, L., Shu, Y., Liang, X., Chen, E.C., Yee, S.W., Zur, A.A., Li, S., Xu, L., Keshari, K.R., Lin, M.J., Chien, H.C., Zhang, Y., Morrissey, K.M., Liu, J., Ostrem, J., Younger, N.S., Kurhanewicz, J., Shokat, K.M., Ashrafi, K. & Giacomini, K.M., 2014, "OCT1 is a high-capacity thiamine transporter that regulates hepatic steatosis and is a target of metformin," Proc Natl Acad Sci U S A, 111: 9983-8. PMCID: PMC4103324.
Younger, N.S. Chen, L., Shu, Y., Liang, X., Chen, E.C., Yee, S.W., Zur, A.A., Li, S., Xu, L., Keshari, K.R., Lin, M.J., Chien, H.C., Zhang, Y., Morrissey, K.M., Liu, J., Ostrem, J., Younger, N.S., Kurhanewicz, J., Shokat, K.M., Ashrafi, K. & Giacomini, K.M., 2014, "OCT1 is a high-capacity thiamine transporter that regulates hepatic steatosis and is a target of metformin," Proc Natl Acad Sci U S A, 111: 9983-8. PMCID: PMC4103324.
Etemadi, M. Chung, P., Heller, J.A., Etemadi, M., Ottoson, P.E., Liu, J.A., Rand, L. & Roy, S., 2014, "Rapid and low-cost prototyping of medical devices using 3D printed molds for liquid injection molding," J Vis Exp: e51745.
Greninger, A.L. Coffey, L.L., Page, B.L., Greninger, A.L., Herring, B.L., Russell, R.C., Doggett, S.L., Haniotis, J., Wang, C., Deng, X. & Delwart, E.L., 2014, "Enhanced arbovirus surveillance with deep sequencing: Identification of novel rhabdoviruses and bunyaviruses in Australian mosquitoes," Virology, 448: 146-58. PMCID: PMC3870893.
Dang, E.V. Cyster, J.G., Dang, E.V., Reboldi, A. & Yi, T., 2014, "25-Hydroxycholesterols in innate and adaptive immunity," Nat Rev Immunol, 14: 731-43. Review.
Zepeda, O. Doitsh, G., Galloway, N.L., Geng, X., Yang, Z., Monroe, K.M., Zepeda, O., Hunt, P.W., Hatano, H., Sowinski, S., Munoz-Arias, I. & Greene, W.C., 2014, "Cell death by pyroptosis drives CD4 T-cell depletion in HIV-1 infection," Nature, 505: 509-14. PMCID: PMC4047036.
Pinney, J.R. Doroudian, G., Pinney, J., Ayala, P., Los, T., Desai, T.A. & Russell, B., 2014, "Sustained delivery of MGF peptide from microrods attracts stem cells and reduces apoptosis of myocytes," Biomed Microdevices, 16: 705-15. NIHMSID 678922.
Dumesic, P.A. Dumesic, P.A. & Madhani, H.D., 2014, "Recognizing the enemy within: licensing RNA-guided genome defense," Trends Biochem Sci, 39: 25-34. PMCID: PMC3902128.
Dumesic, P.A. Dumesic, P.A., Homer, C.M., Moresco, J.J., Pack, L.R., Shanle, E.K., Coyle, S.M., Strahl, B.D., Fujimori, D.G., Yates, J.R., 3rd & Madhani, H.D., 2014, "Product Binding Enforces the Genomic Specificity of a Yeast Polycomb Repressive Complex," Cell, 160(1-2):204-18, PMCID: PMC4303595.
Homer, C.M. Dumesic, P.A., Homer, C.M., Moresco, J.J., Pack, L.R., Shanle, E.K., Coyle, S.M., Strahl, B.D., Fujimori, D.G., Yates, J.R., 3rd & Madhani, H.D., 2014, "Product Binding Enforces the Genomic Specificity of a Yeast Polycomb Repressive Complex," Cell, 160(1-2):204-18, PMCID: PMC4303595.
Broadhurst, M.J. Dunham, R.M., Vujkovic-Cvijin, I., Yukl, S.A., Broadhurst, M.J., Loke, P., Albright, R.G., Wong, J.K., Lederman, M.M., Somsouk, M., Hunt, P.W., Martin, J.N., Deeks, S.G. & McCune, J.M., 2014, "Discordance between peripheral and colonic markers of inflammation during suppressive ART," J Acquir Immune Defic Syndr, 65: 133-41. PMCID: PMC3997573.
Shiow, L.R. Fancy, S.P., Harrington, E.P., Baranzini, S.E., Silbereis, J.C., Shiow, L.R., Yuen, T.J., Huang, E.J., Lomvardas, S. & Rowitch, D.H., 2014, "Parallel states of pathological Wnt signaling in neonatal brain injury and colon cancer," Nat Neurosci, 17: 506-12. PMCID: PMC3975168.
Harrington, E. Fancy, S.P., Harrington, E.P., Baranzini, S.E., Silbereis, J.C., Shiow, L.R., Yuen, T.J., Huang, E.J., Lomvardas, S. & Rowitch, D.H., 2014, "Parallel states of pathological Wnt signaling in neonatal brain injury and colon cancer," Nat Neurosci, 17: 506-12. PMCID: PMC3975168.
Ostrem, B.E.  Gertz, C.C., Lui, J.H., LaMonica, B.E., Wang, X. & Kriegstein, A.R., 2014, "Diverse behaviors of outer radial glia in developing ferret and human cortex," J Neurosci, 34: 2559-70. PMCID: PMC3921426.
Horlbeck, M.A. Gilbert, L.A.*, Horlbeck, M.A.*, Adamson, B., Villalta, J.E., Chen, Y., Whitehead, E.H., Guimaraes, C., Panning, B., Ploegh, H.L., Bassik, M.C., Qi, L.S., Kampmann, M. & Weissman, J.S., 2014, "Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation," Cell, 159: 647-61. PMCID: PMC4253859. *co-first authors.
Meyerowitz, J.G. Gustafson, W.C.*, Meyerowitz, J.G.*, Nekritz, E.A., Chen, J., Benes, C., Charron, E., Simonds, E.F., Seeger, R., Matthay, K.K., Hertz, N.T., Eilers, M., Shokat, K.M. & Weiss, W.A., 2014, "Drugging MYCN through an allosteric transition in Aurora kinase A," Cancer Cell, 26: 414-27. *co-first authors. PMCID: PMC4160413.
Paredes, M.F. Hwang, W.W., Salinas, R.D., Siu, J.J., Kelley, K.W., Delgado, R.N., Paredes, M.F., Alvarez-Buylla, A., Oldham, M.C. & Lim, D.A., 2014, "Distinct and separable roles for EZH2 in neurogenic astroglia," Elife, 3: e02439. PMCID: PMC4032491.
Delgado, R.N. Hwang, W.W., Salinas, R.D., Siu, J.J., Kelley, K.W., Delgado, R.N., Paredes, M.F., Alvarez-Buylla, A., Oldham, M.C. & Lim, D.A., 2014, "Distinct and separable roles for EZH2 in neurogenic astroglia," Elife, 3: e02439. PMCID: PMC4032491.
Kelley, K.W. Hwang, W.W., Salinas, R.D., Siu, J.J., Kelley, K.W., Delgado, R.N., Paredes, M.F., Alvarez-Buylla, A., Oldham, M.C. & Lim, D.A., 2014, "Distinct and separable roles for EZH2 in neurogenic astroglia," Elife, 3: e02439. PMCID: PMC4032491.
Homer, C.M. Jayaraman, B., Crosby, D.C., Homer, C., Ribeiro, I., Mavor, D., Frankel, A.D., 2014, "NA-directed remodeling of the HIV-1 Rev protein orchestrates assembly of the Rev-Rev response element complex." eLife;10.7554/eLife.04120 PMCID: PMC4360532.
Walsh, L.A. Kam, K.R.*, Walsh, L.A.*, Bock, S.M., Ollerenshaw, J.D., Ross, R.F. & Desai, T.A., 2014, "The effect of nanotopography on modulating protein adsorption and the fibrotic response," Tissue Eng Part A, 20: 130-8. *co-first authors. PMCID: PMC3875207.
Khan, I.S. Khan, I.S., Mouchess, M.L., Zhu, M.L., Conley, B., Fasano, K.J., Hou, Y., Fong, L., Su, M.A. & Anderson, M.S., 2014, "Enhancement of an anti-tumor immune response by transient blockade of central T cell tolerance," J Exp Med, 211: 761-8. PMCID: PMC4010907.
Khan, I.S. Khan, I.S., Taniguchi, R.T., Fasano, K.J., Anderson, M.S. & Jeker, L.T., 2014, "Canonical microRNAs in thymic epithelial cells promote central tolerance," Eur J Immunol, 44: 1313-9. PMCID: PMC4141217.
Knox, R.N. Knox, R., Brennan-Minnella, A.M., Lu, F., Yang, D., Nakazawa, T., Yamamoto, T., Swanson, R.A., Ferriero, D.M. & Jiang, X., 2014, "NR2B phosphorylation at tyrosine 1472 contributes to brain injury in a rodent model of neonatal hypoxia-ischemia," Stroke, 45: 3040-7. PMCID: PMC4175024.
Lee, A.M.  Lee, A.M., Hoy, J.L., Bonci, A., Wilbrecht, L., Stryker, M.P. & Niell, C.M., 2014, "Identification of a brainstem circuit regulating visual cortical state in parallel with locomotion," Neuron, 83: 455-66. PMCID: PMC4151326.
Lee, A.T.  Lee, A.T., Gee, S.M., Vogt, D., Patel, T., Rubenstein, J.L. & Sohal, V.S., 2014, "Pyramidal neurons in prefrontal cortex receive subtype-specific forms of excitation and inhibition," Neuron, 81: 61-8. PMCID: PMC3947199.
Lee, A.T.  Lee, A.T., Vogt, D., Rubenstein, J.L. & Sohal, V.S., 2014, "A class of GABAergic neurons in the prefrontal cortex sends long-range projections to the nucleus accumbens and elicits acute avoidance behavior," J Neurosci, 34: 11519-25. PMCID: PMC4145166.
Li, F.Y. Li, F.Y., Chaigne-Delalande, B., Rao, V.K., Zhang, Y., Matthews, H., Kuijpers, T.T., Su, H., Uzel, G. & Lenardo, M.J., 2014, "Clinical utility gene card for: X-linked immunodeficiency with magnesium defect, Epstein-Barr virus infection, and neoplasia (XMEN)," Eur J Hum Genet, ejhg.2014.179. [Epub ahead of print]. PMC Journal in process.
Li, F.Y. Li, F.Y., Chaigne-Delalande, B., Su, H., Uzel, G., Matthews, H. & Lenardo, M.J., 2014, "XMEN disease: a new primary immunodeficiency affecting Mg2+ regulation of immunity against Epstein-Barr virus," Blood, 123: 2148-52. PMCID: PMC3975255.
Kim, T.N. Lindskog, H., Kim, Y.H., Jelin, E.B., Kong, Y., Guevara-Gallardo, S., Kim, T.N. & Wang, R.A., 2014, "Molecular identification of venous progenitors in the dorsal aorta reveals an aortic origin for the cardinal vein in mammals," Development, 141: 1120-8. PMCID: PMC3929407.
Meyerowitz, J.G. Marshall, G.M., Carter, D.R., Cheung, B.B., Liu, T., Mateos, M.K., Meyerowitz, J.G. & Weiss, W.A., 2014, "The prenatal origins of cancer," Nat Rev Cancer, 14: 277-89. PMCID: PMC4041218.
Mason, A.R. Mason, A.R., Ziemann, A. & Finkbeiner, S., 2014, "Targeting the low-hanging fruit of neurodegeneration," Neurology, 83: 1470-3. PMCID: PMC4206158.
Herman, A.B. Miller, Z.A., Hinkley, L.B., Herman, A., Honma, S., Findlay, A., Block, N., Ketelle, R., Rabinovici, G., Rosen, H., Nagarajan, S.S., Miller, B.L. & Gorno-Tempini, M.L., 2014, "Anomalous functional language lateralization in semantic variant PPA," Neurology, PMCID: PMC4336079.
Kelley, K.W. Molofsky, A.V., Kelley, K.W., Tsai, H.H., Redmond, S.A., Chang, S.M., Madireddy, L., Chan, J.R., Baranzini, S.E., Ullian, E.M. & Rowitch, D.H., 2014, "Astrocyte-encoded positional cues maintain sensorimotor circuit integrity," Nature, 509: 189-94. PMCID: PMC4057936.
Kim, T.N. Murphy, P.A.*, Kim, T.N.*, Huang, L.*, Nielsen, C.M., Lawton, M.T., Adams, R.H., Schaffer, C.B. & Wang, R.A., 2014, "Constitutively active Notch4 receptor elicits brain arteriovenous malformations through enlargement of capillary-like vessels," Proc Natl Acad Sci U S A, 111: 18007-12. *co-first authors. PMCID: PMC4273347.
Greninger, A.L. Naccache, S.N., Federman, S., Veeraraghavan, N., Zaharia, M., Lee, D., Samayoa, E., Bouquet, J., Greninger, A.L., Luk, K.C., Enge, B., Wadford, D.A., Messenger, S.L., Genrich, G.L., Pellegrino, K., Grard, G., Leroy, E., Schneider, B.S., Fair, J.N., Martinez, M.A., Isa, P., Crump, J.A., DeRisi, J.L., Sittler, T., Hackett, J., Jr., Miller, S. & Chiu, C.Y., 2014, "A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples," Genome Res, 24: 1180-92. PMCID: PMC4079973.
Ostrem, B.E.  Ostrem, B.E., Lui, J.H., Gertz, C.C. & Kriegstein, A.R., 2014, "Control of outer radial glial stem cell mitosis in the human brain," Cell Rep, 8: 656-64. PMCID: PMC4127493.
Ye, J. Parchem, R.J., Ye, J., Judson, R.L., LaRussa, M.F., Krishnakumar, R., Blelloch, A., Oldham, M.C. & Blelloch, R., 2014, "Two miRNA clusters reveal alternative paths in late-stage reprogramming," Cell Stem Cell, 14: 617-31. PMCID: PMC4305531
Liu, S.J. Park, D.H., Hong, S.J., Salinas, R.D., Liu, S.J., Sun, S.W., Sgualdino, J., Testa, G., Matzuk, M.M., Iwamori, N. & Lim, D.A., 2014, "Activation of neuronal gene expression by the JMJD3 demethylase is required for postnatal and adult brain neurogenesis," Cell Rep, 8: 1290-9. PMCID: PMC4201382.
Park, J. Park, J.S., Rhau, B., Hermann, A., McNally, K.A., Zhou, C., Gong, D., Weiner, O.D., Conklin, B.R., Onuffer, J. & Lim, W.A., 2014, "Synthetic control of mammalian-cell motility by engineering chemotaxis to an orthogonal bioinert chemical signal," Proc Natl Acad Sci U S A, 111: 5896-901. PMCID: PMC4000811.
Pattabiraman, K. Pattabiraman, K., Golonzhka, O., Lindtner, S., Nord, A.S., Taher, L., Hoch, R., Silberberg, S.N., Zhang, D., Chen, B., Zeng, H., Pennacchio, L.A., Puelles, L., Visel, A. & Rubenstein, J.L., 2014, "Transcriptional regulation of enhancers active in protodomains of the developing cerebral cortex," Neuron, 82: 989-1003. PMCID: PMC4104757.
Pinney, J.R. Pinney, J.R., Du, K.T., Ayala, P., Fang, Q., Sievers, R.E., Chew, P., Delrosario, L., Lee, R.J. & Desai, T.A., 2014, "Discrete microstructural cues for the attenuation of fibrosis following myocardial infarction," Biomaterials, 35: 8820-8. PMCID: PMC4144416.
Pinney, J.R. Pinney, J.R., Melkus, G., Cerchiari, A., Hawkins, J. & Desai, T.A., 2014, "Novel functionalization of discrete polymeric biomaterial microstructures for applications in imaging and three-dimensional manipulation," ACS Appl Mater Interfaces, 6: 14477-85. PMCID: PMC4149329.
Ramos, A.D. Potts, M.B., Siu, J.J., Price, J.D., Salinas, R.D., Cho, M.J., Ramos, A.D., Hahn, J., Margeta, M., Oldham, M.C. & Lim, D.A., 2014, "Analysis of Mll1 deficiency identifies neurogenic transcriptional modules and Brn4 as a factor for direct astrocyte-to-neuron reprogramming," Neurosurgery, 75: 472-82; discussion 482. PMC Journal in process.
Dang, E.V. Reboldi, A., Dang, E.V., McDonald, J.G., Liang, G., Russell, D.W. & Cyster, J.G., 2014, "Inflammation. 25-Hydroxycholesterol suppresses interleukin-1-driven inflammation downstream of type I interferon," Science, 345: 679-84. PMCID: PMC4289637
Reed, D.E. Reed, D.E. & Shokat, K.M., 2014, "Targeting osteosarcoma," Proc Natl Acad Sci U S A, 111: 18100-1. PMCID: PMC4280583
Knox, R.N. Sheldon, R.A., Lee, C.L., Jiang, X., Knox, R.N. & Ferriero, D.M., 2014, "Hypoxic preconditioning protection is eliminated in HIF-1alpha knockout mice subjected to neonatal hypoxia-ischemia," Pediatr Res, 76: 46-53. PMCID: PMC4167022.
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Park, J. Zhu, J.W., Doan, K., Park, J., Chau, A.H., Zhang, H., Lowell, C.A. & Weiss, A., 2011, "Receptor-like tyrosine phosphatases CD45 and CD148 have distinct functions in chemoattractant-mediated neutrophil migration and response to S. aureus," Immunity, 35: 757-69. PMCID: PMC3245876.
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Chang-Berger, A. Berger, A.C. & Whistler, J.L., 2010, "How to design an opioid drug that causes reduced tolerance and dependence," Ann Neurol, 67: 559-69. PMCID: PMC2943346.
Broadhurst, M.J. Broadhurst, M.J., Leung, J.M., Kashyap, V., McCune, J.M., Mahadevan, U., McKerrow, J.H. & Loke, P., 2010, "IL-22+ CD4+ T cells are associated with therapeutic trichuris trichiura infection in an ulcerative colitis patient," Sci Transl Med, 2: 60ra88. PMC Journal in Process.
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Chou, J. Chou, J., Provot, S. & Werb, Z., 2010, "GATA3 in development and cancer differentiation: cells GATA have it!," J Cell Physiol, 222: 42-9. PMCID: PMC2915440.
Collins, C.A. Collins, C.A. & Brown, E.J., 2010, "Cytosol as battleground: ubiquitin as a weapon for both host and pathogen," Trends Cell Biol, 20: 205-13. Non-federal funded.
Davis, B. Davis, B., Tang, J., Zhang, L., Mu, D., Jiang, X., Biran, V., Vexler, Z. & Ferriero, D.M., 2010, "Role of vasodilator stimulated phosphoprotein in VEGF induced blood-brain barrier permeability in endothelial cell monolayers," Int J Dev Neurosci, 28: 423-8. PMCID: PMC2918884.
Zepeda, O. Doitsh, G., Cavrois, M., Lassen, K.G., Zepeda, O., Yang, Z., Santiago, M.L., Hebbeler, A.M. & Greene, W.C., 2010, "Abortive HIV infection mediates CD4 T cell depletion and inflammation in human lymphoid tissue," Cell, 143: 789-801. PMCID: PMC3026834.
Harrington, E. Fancy, S.P., Kotter, M.R., Harrington, E.P., Huang, J.K., Zhao, C., Rowitch, D.H. & Franklin, R.J., 2010, "Overcoming remyelination failure in multiple sclerosis and other myelin disorders," Exp Neurol, 225: 18-23. Review.
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Harrington, E. Harrington, E.P., Zhao, C., Fancy, S.P., Kaing, S., Franklin, R.J. & Rowitch, D.H., 2010, "Oligodendrocyte PTEN is required for myelin and axonal integrity, not remyelination," Ann Neurol, 68: 703-16. PMCID: PMC2966537.
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Ianculescu, A.G. Ianculescu, A.G. & Scanlan, T.S., 2010, "3-Iodothyronamine (T(1)AM): a new chapter of thyroid hormone endocrinology?," Mol Biosyst, 6: 1338-44.
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Mirzadeh, Z. Jacques, T.S., Swales, A., Brzozowski, M.J., Henriquez, N.V., Linehan, J.M., Mirzadeh, Z., C, O.M., Naumann, H., Alvarez-Buylla, A. & Brandner, S., 2010, "Combinations of genetic mutations in the adult neural stem cell compartment determine brain tumour phenotypes," EMBO J, 29: 222-35. PMCID: PMC2808375.
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Wu, J. Kapitzky, L, Beltrao, P, Berens, TJ, Gassner, N, Zhou, C, Wüster, A, Wu, J, Babu, MM, Elledge, SJ, Toczyski, D, Lokey, RS, Krogan, NJ., 2010, "Cross-species chemogenomic profiling reveals evolutionarily conserved drug mode of action," Mol Syst Biol, 6:451. PMCID: PMC3018166.
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Kratter, I.H. Kratter, I.H. & Finkbeiner, S., 2010, "PolyQ disease: too many Qs, too much function?," Neuron, 67: 897-9. PMCID: PMC3989162.
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Wilkinson, C.L.  Peebles, C.L., Yoo, J., Thwin, M.T., Palop, J.J., Noebels, J.L. & Finkbeiner, S., 2010, "Arc regulates spine morphology and maintains network stability in vivo," Proc Natl Acad Sci U S A, 107: 18173-8. PMCID: PMC2964216.
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Young, D.M. Yang, S.B., Lee, H.Y., Young, D.M., Tien, A.C., Rowson-Baldwin, A., Shu, Y.Y., Jan, Y.N. & Jan, L.Y., 2012, "Rapamycin induces glucose intolerance in mice by reducing islet mass, insulin content, and insulin sensitivity," J Mol Med (Berl), 90: 575-85. PMCID: PMC3354320.
Young, D.M. Young, D.M., Schenk, A.K., Yang, S.B., Jan, Y.N. & Jan, L.Y., 2010, "Altered ultrasonic vocalizations in a tuberous sclerosis mouse model of autism," Proc Natl Acad Sci U S A, 107: 11074-9. PMCID: PMC2890736.
Zachariah, M.A. Zachariah, M.A. & Cyster, J.G., 2010, "Neural crest-derived pericytes promote egress of mature thymocytes at the corticomedullary junction," Science, 328: 1129-35. PMCID: PMC3107339.